基于定点突变技术提高甲酸脱氢酶(LeFDH)的稳定性
首发时间:2021-09-16
摘要:甲酸脱氢酶(Formate dehydrogenase,FDH)可利用价格低廉的底物将NAD+还原成NADH,是最具工业应用潜力的辅酶再生酶之一。然而多数的野生甲酸脱氢酶都具有的催化效率低、操作稳定性差等缺陷,限制了它的实际应用推广。本工作通过同源建模,获得了来自Lodderomyces elongisporus的甲酸脱氢酶(LeFDH)的三维结构,预测了活性中心以及辅酶、底物的结合位点。为了改善其热稳定性,结合分子动力学模拟和序列比对等方法,对远离活性中心的loop环上的4个氨基酸残基进行了突变。酶学性质分析表明,二元突变体K21PK22R在热稳定性方面获得了最大的提升,于65℃条件下孵育60min后仍可保留高于80%的酶活力,而野生型LeFDH在孵育至30min时已完全失活。该研究方法为LeFDH的进一步蛋白质工程改造提供了思路,该研究获得的突变体提升了LeFDH在辅酶再生方面的应用潜力。
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Improving the Stability of Formate Dehydrogenase(LeFDH)by Site-Directed Mutagenesis
Abstract:Formate dehydrogenase (FDH), which can reduce NAD+ to NADH using low cost substrate, is one of the most promising cofactor regenerating enzymes for industrial applications. However, the popularity in commercial processes of native FDHs are limited by its weaknesses in catalytic efficiency and operational stability. In this work, the three-dimensional model of Lodderomyces elongisporus FDH(LeFDH) was created by homology modeling, and the active center as well as the binding sites of cofactor and substrate were predicted. In order to improve the thermal stability, four amino acid residues on the loops which are far away from the active center, were mutated by a comprehensive strategy of molecular dynamics simulations and multiple sequence alignments. The results of enzymatic property analyses showed that the binary mutant K21PK22R obtained the greatest improvement in thermal stability, which can retain more than 80% of enzyme activity after 60 minites incubation at 65 C, while wild-type LeFDH was completely inactivated by incubation up to 30 minites. This study lays the foundation for further protein engineering of LeFDH, and the mutantsobtained in this work increase the potential of LeFDH for cofactor regeneration.
Keywords: Molecular Biology Formate Dehydrogenase Site-Directed Mutagenesis Stability
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基于定点突变技术提高甲酸脱氢酶(LeFDH)的稳定性
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