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期刊论文

Nature of Driving Force for Protein Folding: A Result From Analyzing the Statistical Potential

汤超Hao Li Chao Tang Ned S. Wingreen

PHYS I CAL RE V I EW LETTERS, 1997, 79 (4): 765~768,-0001,():

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摘要/描述

In a statistical approach to protein structure analysis, Miyazawa and Jernigan derived a 20×20 matrix of inter-residue contact energies between different types of amino acids. Using the method of eigenvalue decomposition, we find that the Miyazawa-Jernigan matrix can be accurately reconstructed from its first two principal component vectors as Mij=C0+C1(qi+qj)+C2qiqj, with constant C's, and 20q values associated with the 20 amino acids. This regularity is due to hydrophobic interactions and a force of demixing, the latter obeying Hildebrand's solubility theory of simple liquids.

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