梁毅
一直致力于应用结构分子生物学方法研究蛋白质折叠、生物分子相互作用和酶促反应。
个性化签名
- 姓名:梁毅
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学术头衔:
博士生导师
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学科领域:
生物化学
- 研究兴趣:一直致力于应用结构分子生物学方法研究蛋白质折叠、生物分子相互作用和酶促反应。
梁毅,博士,教授,博士生导师。1985年毕业于武汉大学化学系,1998年在武汉大学获得博士学位。1998年7月至2000年12月在中国科学院生物物理研究所生物大分子国家重点实验室从事蛋白质和分子酶学方面的博士后期研究工作(导师:邹承鲁院士)。2001年1月起至今在武汉大学生命科学学院生物技术系从事结构分子生物学方面的教学与科研工作,2001年12月晋升为教授,2002年7月评为博士生导师。2001-2002年在法国Louis Pasteur大学药理学与物理化学国家重点实验室(CNRS)做访问教授,从事生物质谱学和蛋白质组学领域的合作研究工作。近年来一直致力于应用结构分子生物学方法研究蛋白质折叠、生物分子相互作用和酶促反应,最近两年连续在《J. Biol. Chem.》以通讯作者的身份发表2 篇研究论文,提出混合大分子拥挤的概念,与单一大分子拥挤相比,混合大分子拥挤更有利于溶菌酶复性,能更好地模拟细胞内高度拥挤的环境;利用电喷雾质谱技术等证明了肌酸激酶的酸变性过程符合“三态模型”,其中间态为部分折叠的单体。在国内外杂志上以第一作者或通讯作者的身份发表学术论文40余篇,其中28篇被SCI 收录,13 篇被EI 收录。1997 年和1999 年两获教育部科技进步奖三等奖,2000 年获第二届湖北省优秀博士学位论文,2002 年获湖北省自然科学奖二等奖。2004 年入选教育部“新世纪优秀人才支持计划”。1999年和2003年作为项目主持人获得国家自然科学基金的支持,2004年作为项目主持人获得国家自然科学基金重大研究计划的支持,同年作为子课题负责人获得国家高技术研究发展计划(863计划) 的支持。
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577
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成果数
9
梁毅, Yu-Ling Zhou, Jun-Ming Liao, Fen Du, Yi Liang*
Thermochimica Acta 426(2005)173-178,-0001,():
-1年11月30日
Xanthine oxidase (XO) and copper, zinc superoxide dismutase (Cu, Zn-SOD) are function-related proteins in vivo. Thermodynamics of the interaction of bovine milk XO with bovine erythrocyte Cu, Zn-SOD has been studied using isothermal titration calorimetry (ITC) and fluorescence spectroscopy. The binding of XO to Cu, Zn-SOD is driven by a large favorable enthalpy decrease with a large unfavorable entropy reduction, and shows strong entropy-enthalpy compensation and weak temperature-dependence of Gibbs free energy change. An unexpected, large positive molar heat capacity change of the binding, 3.02kJ mol−1K−1, at all temperatures examined suggests that either hydrogen bond or long-range electrostatic interaction is a major force for the binding. XO quenches the intrinsic fluorescence of Cu, Zn-SOD and causes a small red shift in the fluorescence emission maximum of the protein. A small salt concentration dependence of the binding affinity measured by fluorescence spectroscopy and a large unfavorable change in entropy for the binding measured by ITC suggest that long-range lectrostatic forces do not play an important role in the binding. These results indicate that XO binds to Cu, Zn-SOD with high affinity and that hydrogen bond is a major force for the binding.
Isothermal titration calorimetry, Protein-protein interactions, Superoxide dismutase, Thermodynamics, Xanthine oxidase
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梁毅, Yi Liang a, b, *, Guo-Chang Huang b, Jic Chen a, Jun-Mei Zhou b, l
Thermochimica Acta 376(2001)123-131,-0001,():
-1年11月30日
The unfolding of rabbit muscle-type creatine kinase (MM-CK) induced by guanidine hydrochloride (Gullcl) has been studied by isothermal microcalorimetry, It has been found that the decrease in the activity Of MM-CK in dilute GuHCl solution is due to a slight perturbation of the active site conformation by dilute GuHCl, but not by a reversible inhibition by GuHCl binding at the active site or dissociation of the dimeric protein, The inactivation Of MM-CK precedes the overall conformation change of this enzyme during denaturation by GuHCl, providing a thermodynamic evidence for the proposition that the active site of an enzyme is situated in a limited region more flexible than the enzyme molecule as a whole, The intrinsic enthalpy, Gibbs free energy, and entropy changes for formation of an intermediate state Of MM-CK in the presence of moderate GuHCl concen ations at 25.OO℃ have been determined to be 260. 12.2kJ mol-1. and 830J mol-1K-1. respectively. Further unfolding Of MM-CK is observed when GuHCl concentration is higher than 3.00mol dm-3. and the protein is almost fully unfolded at 5.OOmol dm-3 GuHCl reached. The intrinsic enthalpy. Gibbs free energy. and entropy changes for formation of the unfolded state of MM-CK at 25.OO℃ have been measured as 8600. 23.0kJ mol-1. and 29kJ mol-1 K-1. respectively. The experimental results indicate that the unfolding Of MM-CK by GuHCl exhibits remarkable enthalpy-entropy compensation and the water reorganization is involved in the unfolding reaction.
Creatine kinase, Guanidine hydrochloride, Microcalorimetry, Protein unfolding, Thermodynamics
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【期刊论文】Thermodynamics of the cleavage of DNA induced by adriamycin: a microcalorimetric study
梁毅, Yi Liang a, b, *, Cun-Xin Wang b, Guo-Lin Zou c, Zhi-Yong Wang b, Yu-Wen Liu b, Song-Sheng Qu b
Thermochimica Acta 351(2000)21-27,-0001,():
-1年11月30日
Microcalorimetry was used to measure the change in enthalpy for the scission of calf thymus DNA (ct-DNA) induced by adriamycin (ADM) in the presence of ferric ions, Vitamin C, and oxygen. At 298.15K and pH 7.4, the overall molar reaction enthalpy for this cleavage was-147.1kJ/mol, noticeably higher than that by the mixture of Fe3á, Vitamin C, and O2. Under the same conditions, the enthalpy change for the damage of ct-DNA by the mixture of adriamycin, ferrous ions, and oxygen, however, was nearly zero, indicating that this mixture can not induce any detectable degradation of DNA. These esults suggest that both the activated adriamycin and hydroxyl radical attack DNA strands during the cleavage. A possible mechanism for the cleavage of DNA induced by adriamycin is proposed based on the calorimetric measurements. A novel thermodynamic model for the interactions of DNA with small molecules is also suggested. This is a convenient method tocalculate both the binding constant (Kb) and the standard thermodynamic parameters (ΔbH0m, ΔbG0m, and ΔbS0m) for the binding of adriamycin-Fe3á complex to ct-DNA by the calorimetric data. This nucleotide binding reaction is driven by a favorable enthalpy change, with a large unfavorable entropy change. This result indicates that the binding results in structural changes accompanied by an increase in the order of the whole system, implying that an intercalation mode is involved in adriamycinmediated breakage of DNA.
Adriamycin, DNA cleavage, Intercalation, Microcalorimetry, Thermodynamics
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梁毅, Yi Liang*, Guo-Chang Huang, Jie Chen, Jun-Mei Zhou*
Thermochimica Acta 348(2000)41-47,-0001,():
-1年11月30日
This paper reports a thermodynamic method for the two-substrate nzyme-catalyzed reaction by a random sequential mechanism in the presence of a chemical denaturant. This is a convenient method to produce not only the apparent molar thermodynamic constants (ΔrHm,a anΔ Ka) but also the standard thermod ynamic properties of the ction(ΔrH_111m; ΔrG_000000000m;ΔrS_m). Microcalorimetry has been used to investigate thermod ynamics of the reversible phosphoryl transfer from ATP to creatine catalyzed by rabbit muscle-type creatine kinase (MM-CK) at different concentrations of guanidine hydrochloriΔe (GuHCl). From a thermodynamic viewpoint, this enzyme-catalyzed reaction follows a rapid-equilibrium, random mechanism, i.e. the chemical steps are slower than those for binding of reagents, and there is no obligatory order of binding or release. At 298.15K, the standard enthalpy, Gibbs free energy, and entropy changes for the reaction at low concentrations of GuHCl were Δetermined by this metho to be 25.76kJ mol-1, 14.1kJ mol-1, and 38.9 J K-1mol-1, respectively, in agreement with those in the absence of GuHCl. The experimental results demonstrated the reliability of the above thermodynamic method, and indicated that inactivation of CK by low concentrations of GuHCl had no effect on the standard thermodynamic parameters for the CK-catalyzed reaction. A novel method for the determination of creatine kinase activity, the microcalorimetric assay for CK, was also proposed in this paper. The experimental results showeΔ that GuHCl had a noticeable inØuence on the activity of CK.
Creatine kinase, Guanidine hydrochloride, Inactivation, Microcalorimetry, Thermodynamics
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梁毅, Jun Wu, Fen Du, Peng Zhang, Izhar Ahmed Khan, Jie Chen, Yi Liang *
Journal of Inorganic Biochemistry 99(2005)1145-1154,-0001,():
-1年11月30日
Aluminum is a known neurotoxic agent and its neurotoxic effects may be due to its binding to DNA. However, the mechanism for the interaction of aluminum ions with DNA is not well understood. Here, we report the application of isothermal titration calorimetry (ITC), fluorescence spectroscopy, and UV spectroscopy to investigate the thermodynamics of the binding of aluminum ions to calf thymus DNA (CT DNA) under various pH and temperature conditions. The binding reaction is driven entirely by a large favorable entropy increase but with an unfavorable enthalpy increase in the pH range of 3.5-5.5 and at all temperatures examined. Aluminum ions show a strong and pH-dependent binding affinity to CT DNA, and a large positive molar heat capacity change for the binding, 1.57 kcal mol 1K 1, demonstrates the burial of the polar surface of CT DNA upon groove binding. The fluorescence of ethidium bromide bound to CT DNA is quenched by aluminum ions in a dynamic way. Both Stern-Volmer quenching constant and the binding constant increase with the increase of the pH values, reaching a maximum at pH 4.5, and decline with further increasing the pH to 5.5. At pH 6.0 and 7.0, aluminum ions precipitate CT DNA completely and no binding of aluminum ions to CT DNA is observed by ITC. Combining the results from these three methods, we conclude that aluminum ions bind to CT DNA with high affinity through groove binding under aluminum toxicity pH conditions and precipitate CT DNA under physiological conditions.
Aluminum, Fluorescence quenching, Isothermal titration calorimetry, Metal-DNA interactions, Thermodynamics
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梁毅, Bing-Rui Zhou, Yi Liang‡, Fen Du, Zheng Zhou, and Jie Chen
Vol. 279, No.53, Issue of December 31, pp. 55109-55116, 2004,-0001,():
-1年11月30日
The oxidative refolding of reduced, denatured hen egg white lysozyme in the presence of a mixed macromolecular crowding agent containing both bovine serum albumin (BSA) and polysaccharide has been studied from a physiological point of view. When the total concentration of the mixed crowding agent is 100g/liter, in which the weight ratio of BSA to dextran 70 is 1: 9, the refolding yield of lysozyme after refolding for 4h under this condition increases 24% compared with that in the resence of BSA and 16% compared with dextran 70. A remarkable increase in the refolding yield of lysozyme by a mixed crowding agent containing BSA and Ficoll 70 is also observed. Further folding kinetics analyses show that these two mixed crowding agents accelerate the oxidative refolding of lysozyme remarkably, compared with single crowding agents. These results suggest that the stabilization effects of mixed macromolecular crowding agents are stronger than those of single olysaccharide crowding agents such as dextran 70 and Ficoll 70, whereas the excluded volume effects of mixed macromolecular crowding agents are weaker than those of single protein crowding agents such as BSA. Both the refolding yield and the rate of the oxidative refolding of lysozyme in these two mixed crowded solutions with suitable weight ratios are higher than those in single crowded solutions, indicating that mixed macromolecular crowding agents are more favorable to lysozyme folding and can be used to simulate the intracellular environments more accurately than single rowding agents do.
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梁毅, Yi Liang‡§, Fen Du‡, Sarah Sanglier¶, Bing-Rui Zhou‡, Yi Xia‡, Alain Van Dorsselaer¶, Clarisse Maechling, Marie-Claude Kilhoffer, and Jacques Haiech
Vol. 278, No.32, Issue of August 8, pp. 30098-30105, 2003,-0001,():
-1年11月30日
Electrospray ionization mass spectrometry, isothermal titration calorimetry (ITC), fluorescence spectroscopy, and glutaraldehyde cross-linking SDS-PAGE have been used to study the unfolding of rabbit muscle creatine kinase (MM-CK) induced by acid. The mass spectrometric experiments show that MM-CK is unfolded gradually when titrated with acid. MM-CK is a dimer (the native state) at pH 7.0 and becomes an equilibrium mixture of the dimer and a partially folded monomer (the intermediate) between pH 6.7 and 5.0. The dimeric protein becomes an equilibrium mixture of the intermediate and an unfolded monomer (the unfolded state) between pH 5.0 and 3.0 and is almost fully unfolded at pH 3.0 reached. The results from a "phase diagram" method of fluorescence show that the onformational transition between the native state and the intermediate of MM-CK occurs in the pH range of 7.0-5.2, and the transition between the intermediate and the unfolded state of the protein occurs between pH 5.2 and 3.0. The intrinsic molar enthalpy changes for formation of the unfolded state of MM-CK induced by acid at 15.0, 25.0, 30.0, and 37.0 ℃ have been determined by ITC. A large positive molar heat capacity change of the unfolding, 8.78 kcal mol 1K 1, at all temperatures examined indicates that hydrophobic interaction is the dominant driving force stabilizing the native structure of MM-CK. Combining the results from these four methods, we conclude that the acid-induced unfolding of MM-CK follows a "threestate" model and that the intermediate state of the protein is a partially folded monomer.
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梁毅, Yi Liang, Fen Du, Bing-Rui Zhou, Hui Zhou, Guo-Lin Zou, Cun-Xin Wang and Song-Sheng Qu
Eur. J. Biochem. 269, 2851-2859 (2002) FEBS 2002,-0001,():
-1年11月30日
Microcalorimetry and UV-vis spectroscopy were used to conduct thermodynamic and kinetic investigations of the scission of calf thymus DNA catalyzed by bleomycin A5 (BLM-A5) in the presence of ferrousion and oxygen. The molar reaction enthalpy for the cleavage, the Michaelis-Menten constant for calf thymus DNA and the turnover number of BLM-A5 were calculated by a novel thermokinetic method for an nzyme-catalyzed reaction to be -577
bleomycin, DNA cleavage, kinetics, microcalorimetry, thermodynamics.,
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梁毅, Yi Liang a, b, *, Song-Sheng Qu b, Cun-Xin Wang b, Guo-Lin Zou c, Yuan-Xin Wu d, Ding-Huo Li d
Chemical Engineering Science 55(2000)6071-6078,-0001,():
-1年11月30日
Thermodynamics and kinetics of the dismutation of superoxide anion (O2) catalyzed by superoxide dismutase (SOD) in batch reactors has been studied by on-line reaction calorimetry. The decomposition of hydrogen peroxide catalyzed by catalase is utilized as a source of oxygen and the autoxidation of pyrogallol as a source of the substrate (O2) for SOD. The molar reaction enthalpies of the SOD reaction and the pyrogallol autoxidation have been measured as! 160.1 and !218kJ/mol, respectively, at 298.15K and pH 8.0. The experimental results showed that SOD had no e!ect on the kinetic parameters or the mechanism for pyrogallol autoxidation. This autoxidation followed second-order reaction kinetics in the presence of limited oxygen ("rst order with respect to both pyrogallol and (O2), and the second-order rate constants were determined at 298.15K and pH 8.0 to be 1.25 and 1.30l/mol s in the absence and presence of SOD, respectively. A possible mechanism for the autoxidation of pyrogallol inhibited by SOD was also suggested. (2000) Elsevier Science Ltd. All rights reserved.
Batch reactors, Kinetics, Pyrogallol autoxidation, Reaction calorimetry, Superoxide ismutase, Thermodynamics
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