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2011年02月18日

【期刊论文】Crystal Structure of an Acylpeptide Hydrolase/Esterase from Aeropyrum pernix K1

冯雁, Mark Bartlam, , Ganggang Wang, Haitao Yang, Renjun Gao, Xiaodong Zhao, Guiqiu Xie, Shuigui Cao, Yan Feng, and Zihe Rao, *

Structure, Vol. 12, 1481-1488, August, 2004,-0001,():

-1年11月30日

摘要

Acylpeptide hydrolases (APH; also known as acylam-ino acid releasing enzyme) catalyze the removal of an N-acylated amino acid from blocked peptides. The crystal structure of an APH from the thermophilic arch-aeon Aeropyrum pernix K1 to 2.1 A resolution confirms it to be a member of the prolyl oligopeptidase family of serine proteases. The structure of apAPH is a sym-metric homodimer with each subunit comprised of two domains. The N-terminal domain is a regular seven-bladed β-propeller, while the C-terminal domain has a canonical α/β hydrolase fold and includes the active site and a conserved Ser445-Asp524-His556 catalytic triad. The complex structure of apAPH with an organo- phosphorus substrate, p-nitrophenyl phosphate, has also been determined. The complex structure unam- biguously maps out the substrate binding pocket and provides a basis for substrate recognition by apAPH. A conserved mechanism for protein degradation from archaea to mammals is suggested by the structural features of apAPH.

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2011年02月18日

【期刊论文】植酸酶最新研究进展

冯雁, 康伟, 王智

《生命的化学》,2005,25(2):94~97,-0001,():

-1年11月30日

摘要

植酸酶是一种能广泛应用于食品、饲料和医药工业的商业酶。目前较多的研究工作是通过随机突变、定点突变和晶体结构对照来阐明植酸酶的反应机制以及重要氨基酸的贡献。并以此为基础对酶分子进行改造。其中真菌和细菌分泌的植酸酶的最适pH较低.能够应用于生物体内,因此具有很大的商业前景。

植酸酶, 随机突变, 定点突变, 晶体结构

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2011年02月18日

【期刊论文】Thermolysis of recombinant Escherichia coli for recovering a thermostable enzyme

冯雁, Xiaodong Ren, Dawei Yu, Siping Han, Yan Feng ∗

Biochemical Engineering Journal 33(2007)94-98,-0001,():

-1年11月30日

摘要

The development of recombinant DNA has made it feasible to produce a wide range of valuable protein products in the bacterium Escherichia coli. Extraction of intracellular protein from E. coli is traditionally achieved by mechanical, chemical or enzymatic disruption technology. In this study, thermolysis, which differs from the traditional ones, is presented for disruption of E. coli cells to release recombinant thermostable enzyme. Heat treatment of E. coli at 80℃ is highly effective to destroy the integrity of the bacterial cell wall and release the recombinant thermostable enzyme. At the same time of disruption, the recombinant thermostable enzyme was partially purified. Moreover, thermolysis was carried out in fermentation broth in situ, which may make it a more applicable approach for industrial-scale processes.

Bioseparations, Cell risruption, Downstream processing, Protein recovery, Thermolysis, Escherichia coli

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2011年02月18日

【期刊论文】Overexpression and characterization of a lipase from Bacillus subtilis

冯雁, Jisheng Ma, Zuoming Zhang, Baijing Wang, Xiangju Kong, Yuguo Wang, Shugui Cao*, Yan Feng*

Protein Expression and PuriWcation 45(2006)22-29,-0001,():

-1年11月30日

摘要

A novel plasmid, pBSR2, was constructed by incorporating a strong lipase promoter and a terminator into the original pBD64. A mature lipase gene from Bacillus subtilis strain IFFI10210, an existing strain for lipase expression, was cloned into the plasmid pBSR2 and transformed into B. subtilis A.S.1.1655. Thus, an overexpression strain, BSL2, was obtained. The yield of lipase is about 8.6mg protein/g of wet weight of cell mass and 100-fold higher than that in B. subtilis strain IFFI10210. The recombinant lipase was puriWed in a three-step procedure involving ammonium sulfate fractionation, ion exchange, and gel Wltration chromatography. Characterizations of the puriWed enzyme revealed a molecular mass of 24 kDa in sodium dodecyl sulfate-polyacrylamide gel electrophoresis, maximum activity at 43℃ and pH 8.5 for hydrolysis of p-nitrophenyl caprylate. The values of Km and Vm were found to be 0.37mM and 303 μmolmg-1·min-1, respectively. The substrate speciWcity study showed that p-nitrophenyl caprylate is a preference of the enzyme. The metal ions Ca2+, K+, and Mg2+ can activate the lipase, whereas Fe2+, Cu2+, and Co2+ inhibited it. The activity of the lipase can be increased about 48% by sodium taurocholate at the concentration of 7mM and inhibited at concentrations over 10mM.

Bacillus subtilis, Lipase, Overexpression, Characterization

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2011年02月18日

【期刊论文】Heat effect on the structure and activity of the recombinant glutamate dehydrogenase from a hyperthermophilic archaeon Pyrococcus horikoshii

冯雁, Shiyu Wang, a Yan Feng, a, * Zuoming Zhang, a Baisong Zheng, a Na Li, a Shugui Cao, a Ikuo Matsui, b and Yoshitsugu Kosugib

Archives of Biochemistry and Biophysics 411(2003)56-62,-0001,():

-1年11月30日

摘要

Glutamate dehydrogenase from Pyrococcus horikoshii (Pho-GDH) was cloned and overexpressed in Escherichia coli. The cloned enzyme with His-tag was purified to homogeneity by affinity chromatography and shown to be a hexamer enzyme of 290±8 kDa (subunit mass 48 kDa). Its optimal pH and temperature were 7.6 and 90℃, respectively. The purified enzyme has outstanding thermostability (the half-life for thermal inactivation at 100℃ was 4h). The enzyme shows strict specificity for 2-oxoglutarate and L-glutamate and requires NAD(P)H and NADP as cofactors but it does not reveal activity on NAD as cofactor. Km values of the recombinant enzyme are comparable for both substrates: 0.2mM for L-glutamate and 0.53mM for 2-oxoglutarate. The enzyme was activated by heating at 80℃ for 1h, which was accompanied by the formation of its active conformation. Circular dichroism and fluorescence spectra show that the active conformation is heat-inducible and time-dependent.

Pyrococcus horikoshii, Hyperthermophilic archaea, Glutamate dehydrogenase, Thermostability, Heat activation

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    上海交通大学,上海

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