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2011年02月18日

【期刊论文】An archaeal histone-like protein as an efficient DNA carrier in gene transfer

冯雁, Liang Wenga, Dan Liub, Yuanyuan Lia, Shugui Caoa, Yan Fenga, *

Biochimica et Biophysica Acta 1702(2004)209-216,-0001,():

-1年11月30日

摘要

HPhA, a recombinant histone-like protein from Pyrococcus horikoshii OT3 strain, has compacting activity with DNA as previously reported. The extreme stability and DNA packaging activity of the HPhA make it a candidate as a DNA carrier. Here, the plasmid DNA-HPhA complexes were fully characterized by gel retardation assay and DNase resistance assay. It was further proved that HPhA has in vitro DNA transfection activity. HPhA-mediated transfection efficiency was dependent on the mass ratio of HPhA to DNA, the incubation time and the presence of calcium. A protocol for HPhA-mediated transfection in vitro was established to improve transfection efficiency. The optimal mass ratio of HPhA to DNAwas 6:1, and the incubation time required for the DNA-HPhA complex to be in contact with the cell was 4 h. In addition, the presence of 2 mM CaCl2 in the cell culture medium was required for efficient transfection. Serum did not show inhibition of HPhA-mediated transfection. Most importantly, the cytotoxicity of HPhA is lower than that of commonly used cationic liposome-based gene delivery systems, and HPhA-mediated transfection in NIH 3T3, HEK 293, HL-7702, HepG2 and Cos 7 cell lines in vitro has a higher efficiency and reproducibility. These results demonstrate that the HPhA is a new, potentially widely applicable and highly efficient gene carrier.

Gel retardation assay, Transfection, Histone-like protein, Lipofectamine, Serum resistance

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2011年02月18日

【期刊论文】Structure Based Hyperthermostability of Archaeal Histone HPhA from Pyrococcus horikoshii

冯雁, Ti Li, Fei Sun, Xin Ji, Yan Feng* and Zihe Rao*

J. Mol. Biol.(2003)325, 1031-1037,-0001,():

-1年11月30日

摘要

The histone protein HPhA from the hyperthermophilic archaeon Pyrococcus horikoshii, shows hyperthermostability, as required for optimal growth of the organism at 95℃. The structure of recombinant P. horikoshii HPhA has been determined to 2.3A resolution by molecular replacement, and refined to Rwork and Rfree values of 20.7% and 27.3%, respectively. The HPhA monomer structure is characterized by the histone fold and assembles into a homodimer like other archaeal histones. There are four anions found in the dimer structure, giving rise to clues as to where DNA might bind. A detailed comparison of four known structures of archaeal histones, which evolve and exist under different temperatures, shows that the thermophilic archaeal histone HPhA has a larger hydrophobic contact area, an increased number of hydrogen bonds and a reduced solvent-accessible area. We also observe a unique network of tyrosine residues located at the crossover point of the two HPhA monomers, which locks them together and stabilizes the dimer. These factors together account for the increased thermal stability.

histone, HPhA, Pyrococcus horikoshii, archaea, authors hyperthermostability

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2011年02月18日

【期刊论文】植酸酶最新研究进展

冯雁, 康伟, 王智

《生命的化学》,2005,25(2):94~97,-0001,():

-1年11月30日

摘要

植酸酶是一种能广泛应用于食品、饲料和医药工业的商业酶。目前较多的研究工作是通过随机突变、定点突变和晶体结构对照来阐明植酸酶的反应机制以及重要氨基酸的贡献。并以此为基础对酶分子进行改造。其中真菌和细菌分泌的植酸酶的最适pH较低.能够应用于生物体内,因此具有很大的商业前景。

植酸酶, 随机突变, 定点突变, 晶体结构

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2011年02月18日

【期刊论文】Optimization of recombinant hyperthermophilic esterase production from agricultural waste using response surface methodology

冯雁, Xiaodong Ren, Dawei Yu, Siping Han, Yan Feng *

Bioresource Technology 97(2006)2345-2349,-0001,():

-1年11月30日

摘要

The aim of this work was to evaluate the capability of corn steep liquor being a low cost substrate on the recombinant protein production by cultivating recombinant Escherichia coli and increasing the production of hyperthermophilic esterase (HE). The effect of corn steep liquor, mineral salt and trace metals on hyperthermophilic esterase production was investigated by means of a five-level three-factor central composite rotatable design. Optimized values of the factors were determined and a maximum hyperthermophilic esterase production of 251.39 U/ml was obtained. This value equaled the yield by yeast extract and peptone medium on the whole.

Hyperthermophilic esterase, Corn steep liquor, Response surface methodology

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2011年02月18日

【期刊论文】Overexpression and characterization of a lipase from Bacillus subtilis

冯雁, Jisheng Ma, Zuoming Zhang, Baijing Wang, Xiangju Kong, Yuguo Wang, Shugui Cao*, Yan Feng*

Protein Expression and PuriWcation 45(2006)22-29,-0001,():

-1年11月30日

摘要

A novel plasmid, pBSR2, was constructed by incorporating a strong lipase promoter and a terminator into the original pBD64. A mature lipase gene from Bacillus subtilis strain IFFI10210, an existing strain for lipase expression, was cloned into the plasmid pBSR2 and transformed into B. subtilis A.S.1.1655. Thus, an overexpression strain, BSL2, was obtained. The yield of lipase is about 8.6mg protein/g of wet weight of cell mass and 100-fold higher than that in B. subtilis strain IFFI10210. The recombinant lipase was puriWed in a three-step procedure involving ammonium sulfate fractionation, ion exchange, and gel Wltration chromatography. Characterizations of the puriWed enzyme revealed a molecular mass of 24 kDa in sodium dodecyl sulfate-polyacrylamide gel electrophoresis, maximum activity at 43℃ and pH 8.5 for hydrolysis of p-nitrophenyl caprylate. The values of Km and Vm were found to be 0.37mM and 303 μmolmg-1·min-1, respectively. The substrate speciWcity study showed that p-nitrophenyl caprylate is a preference of the enzyme. The metal ions Ca2+, K+, and Mg2+ can activate the lipase, whereas Fe2+, Cu2+, and Co2+ inhibited it. The activity of the lipase can be increased about 48% by sodium taurocholate at the concentration of 7mM and inhibited at concentrations over 10mM.

Bacillus subtilis, Lipase, Overexpression, Characterization

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