吕红
1、肿瘤相关基因的功能研究 2、酵母代谢工程
个性化签名
- 姓名:吕红
- 目前身份:
- 担任导师情况:
- 学位:
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学术头衔:
博士生导师
- 职称:-
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学科领域:
光学
- 研究兴趣:1、肿瘤相关基因的功能研究 2、酵母代谢工程
吕红博士,1997年获得俄罗斯科学院生物学phD学位,回国后分别在南京大学生命科学院和复旦大学生命科学院完成两站博士后的研究工作,2001年5月留在复旦大学生命科学学院遗传学研究所,从事科研和教学工作。目前主要研究方向:
1、肿瘤相关基因的功能研究
我们从肿瘤相关的基因入手,通过酵母双杂交技术,寻找与肿瘤基因编码蛋白相互作用的蛋白,建立蛋白质相互作用的网络图谱;同时在细胞水平研究蛋白质和蛋白质之间的相互作用的生物学意义,确定这些肿瘤相关基因的功能。另一方面,生物体内大约有三分之一是膜蛋白,它们在物质运输、信号传导、细胞间相互作用等基本的生命活动中发挥了重要作用。传统的酵母双杂交系统不适合这一类蛋白的研究,因此,我们建立了膜蛋白酵母双杂交系统,使我们能更好地研究各种类型的蛋白质之间的相互作用。
2、酵母代谢工程
通过对酵母细胞的遗传改造,利用酵母生产植物次生代谢产物。这些植物的次生代谢产物具有重要的药用价值,但是来源有限。
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11
吕红, Li Shena, Jian Hub, Hong Lua, *, Ming Wua, Wenxin Qinb, Dafang Wanb, Yu-Yang Lia, Jianren Gub
FEBS Letters 540(2003)86-90,-0001,():
-1年11月30日
Bcl-2/adenovirus E1B 19 kDa interacting protein 2-like, BNIP-2-like (BNIPL) is a recently cloned and characterized apoptosis-associated protein that shares 72% homology with BNIP-2. It is highly expressed in human placenta and lung. A yeast two-hybrid system was used to obtain two BNIPL-interacting proteins, MIF (macrophage migration inhibitory factor) and GFER (growth factor erv1 (Saccharomyces cerevisiae)-like). The interactions were con
BNIPL, Yeast two-hybrid, Cell proliferation, Apoptosis
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吕红, Hong Lu a, Wen Xin Zou a, Jun Cai Meng a, c, Jun Hu b, Ren Xiang Tan a, *
Plant Science 151(2000)67-73,-0001,():
-1年11月30日
In addition to ergosterol (I), 3b, 5a, 6b-trihydroxyergosta-7, 22-diene (II), 3b-hydroxy-ergosta-5-ene (Ⅲ), 3-oxo-ergosta-4, 6, 8 (14), 22-tetraene (IV), 3b-hydroxy-5a, 8a-epidioxy-ergosta-6, 22-diene (V), 3b-hydroxy-5a,8a-epidioxy-ergosta-6, 9 (11), 22-triene (VI) and 3-oxo-ergosta-4-ene (VII), a plant hormone indole-3-acetic acid (IAA) and three new antimicrobial metabolites were characterized from the culture of Colletotrichum sp., an endophyte isolated from inside the stem of Artemisia annua. The structures of the new metabolites were elucidated by a combination of spectroscopic methods (IR, MS, 1H and 13C NMR) as 6-isoprenylindole-3-carboxylic acid (1), 3b,5a-dihydroxy-6b-acetoxy-ergosta-7, 22-diene (2) and 3b, 5a-dihydroxy-6b-phenylacetyloxy-ergosta-7, 22-diene (3), respectively. The compounds 1-3 and Ⅲ-V inhibited the growth of all the tested bacteria (Bacillus subtilis, Staphylococcus aureus, Sarcina lutea and Pseudomonas sp.) with minimal inhibitory concentrations (MICs) ranging from 25 to 75 mg: ml. Moreover, metabolites 2 and 3, together with the known sterols III and V, were inhibitory against the fungi Candida albicans and Aspergillus niger with MICs between 50 and 100 mg: ml. At 200 mg: ml, compounds 1-3, III and IV were shown to be fungistatic to the crop pathogenic fungi Gaeumannomyces graminis var. tritici, Rhizoctonia cerealis, Helminthosporium sati6um and Phytophthora capisici. This is the first report on the endophytic fungus from A. annua and the bioactive metabolites thereof.
Artemisia annua, Asteraceae, Endophyte, Metabolites, Auxin, Antimicrobial
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【期刊论文】Antifungal activity of Artemisia annua endophyte cultures against phytopathogenic fungi
吕红, Chang Hong Liu, Wong Xin Zou, Hong Lu, Ren Xiang Tan *
Journal of Biotechnology 88(2001)277-282,-0001,():
-1年11月30日
Artemisia annua, well recognized for its production of antimalarial drug artemisinin, is seldom attacked by any of phytopathogenic fungi, which could be partially associated with the presence of endophytes. Present investigation is aiming at disclosing whether the endophytes inside A. annua produce antifungal substances. A total of 39 endophytes were isolated and fermented, and the ferment broth was evaluated in vitro for the antifungal activity against crop-threatening fungi Gaeumannomyces graminis var. tritici, Rhizoctonia cerealis, Helminthosporium sati um, Fusarium graminearum, Gerlachia ni alis and Phytophthora capsici. These plant pathogens are still causing wheat take-all, sharp eyespot, common rot, scab, snow mould, and pepper phytophthora blight, respectively. Out of 39 endophytes investigated, 21 can produce in vitro substances that are inhibitory to all or a few of the tested phytopathogens whereas the rest yielded nothing active. Moreover, the most active broth of endophyte IV403 was extracted with EtOAc and n-butanol, and comparisons of the antifungal activity of the extracts indicated that the major active metabolites were EtOAc-extractable.
Endophytes, Metabolites, Antifungal activity, Phytopathogenic fungi
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吕红
中国科学C辑生命科学,2005,35(1):37~43,-0001,():
-1年11月30日
利用同源重组的方法,构建了具有高拷贝数和高稳定性的新型酿酒酵母表达质粒。对酵母附加体型载体pHC11进行一系列改造,得到质粒pHC11R,并用适当的酶切线性化;利用PCR反应得到人IFNa2b表达单元片段,它的两端和线性化的pHC11R的两端具有50bp左右的同源区段。上述两个片段共转化酿酒酵母,在酵母体内经同源重组后得到表达质粒pHC11R-IFNa2b,该表达质粒与pHC11-IFNoa2b相比去除了质粒上用于在大肠杆菌中复制和筛选所需的序列,在宿主菌中的稳定性和拷贝数均有明显提高,同时外源基因的表达量也获得了一定程度的提高。在此基础上,进一步构建了带有不同表达元件的pHR系列载体,使得外源基因能够通过同源重组在酿酒酵母中快速、方便地克隆和表达。
同源重组 酿酒酵母 表达质粒
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【期刊论文】pp5644 Interacts with phosphatidylinositol-4-phosphate adaptor protein-1 associated protein-1
吕红, Xiao-Xia Ye, , Hong Lu, Yao Yu, Ning Ding, Nai-Ling Zhang, Ke-Ke Huo, Da-Fang Wan, Yu-Yang Li, and Jian-Ren Gu
Molecular and Cellular Biochemistry 271: 151~158, 2005.,-0001,():
-1年11月30日
The human novel gene pp5644 (GeneBank Accession No. AF289559) coding for 124 amino acids was recently cloned. Overexpression of pp5644 in Hela cells significantly inhibited the growth and colony formation. The pp5644-interacting protein FAPP1 (phosphatidylinositol-four-phosphate adaptor protein1) associated protein-1, called FASP1, was obtained by using yeast two-hybrid system. The interaction between pp5644 and FASP1 was experimentally confirmed by GST pull-down assay in vitro and co-immunoprecipitation assay in vivo. Co-localization of pp5644 and FASP1 in cytoplasm in Hela cells could further support the interaction. Based on the experimental results, it is suggested that pp5644 physically bind to FASP1 and the biological significance of this kind of interaction in vivo is discussed.
pp5644,, yeast two-hybrid,, FASP1,, phosphoinositides
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【期刊论文】HCC-Associated Protein HCAP1, a Variant of GEMIN4, Interacts with Zinc-Finger Proteins
吕红, Yujun Di, Jinjun Li, Yu Zhang, Xianghuo He, Hong Lu, Dongbin Xu, Jiqiang Ling, Keke Huo, Dafang Wan, Yu-Yang Li, * and Jianren Gu
J. Biochem. 133, 713~718 (2003),-0001,():
-1年11月30日
The gene HCAP1 (HCC-associated Protein 1), one variant of GEMIN4, has been mapped in a minimum LOH region on chromosome 17p13.3 and encodes a 1047-amino acid protein. Function predictions based on the amino acid sequence of protein HCAP1 revealed it to contain one helix-loop-helix motif and one leucine zipper domain. Using yeast two-hybrid screening, five zinc-finger proteins were identified as HCAP1-interacting proteins. Among them, NDP52 (nuclear dot protein 52) appeared most frequently in positive clones and was the most strongly interacting protein. Then, the interaction between HCAP1 and NDP52 was confirmed by GST pull-down assay and a coimmunoprecipitation experiment. Moreover, an immunofluorescent staining assay indicated that NDP52 colocalizes with HCAP1 in the cytoplasm. By deletion analysis, the leucine zipper domain of HCAP1 and the zinc finger domain of NDP52 were identified as important regions responsible for the interaction.
coimmunoprecipitation,, co-localization,, HCAP1,, NDP52,, yeast two-hybrid.,
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吕红, You-Feng Yang, Han-Ying Yuan, Nan-Song Liu, Xiang-Ling Chen, Bu-Yu Gao, Hong Lu, Yu-Yang Li
World Journal of Gastroenterology ISSN 1007-9327,-0001,():
-1年11月30日
AIM: Interferon α2b (IFNα2b) and thymosin α1 (Tα1) exhibit synergic effects in the treatment of hepatitis B and hepatitis C when used together. For developing a fusion protein drug, fusion proteins of IFNα2b and Tα1 linked by different lengths of (G4S)n (n=1-3) were constructed and expressed in Pichia pastoris. METHODS: Using PCR and molecular clone techniques, the fusion genes of IFNα2b-(G4S)n-Tα1 (n=1-3) were constructed and subcloned into the eukaryotic expression vector pPIC9. After transformation of these plasmids into P. pastoris, the expressed fusion proteins IFNα2b-(G4S) n-Tα1 (n=1-3) were obtained. These proteins were purified through diethylaminoethyl (DEAE) affinity chromatography and Superdex 75 gel filtration and analyzed by SDSPAGE and Western blot. Antiviral and E-rosette assays were used to investigate the bioactivities of these fusion proteins. RESULTS: DNA sequencing confirmed that the fusion genes of IFNα2b-(G4S)n-Tα1 (n=1-3) were correctly cloned to the pPIC9 vector. The recombinant IFNα2b-(G4S)n-Tα1 (n=1-3) fusion proteins expressed in P. pastoris were purified with DEAE and Superdex™ 75 gel filtration chromatography. The fusion proteins could be observed on sodium dodecylsulfate-polyacrylamide gel electrophoresis with molecular weight (MW) of 23.2, 22.9, and 22.6 ku, respectively, and reacted to the IFNα2b monoclonal antibody and Tα1 polyclonal antibody. The purified fusion proteins exhibit antiviral activity and can enhance the percentage of E-rosette-forming-cell in E-rosette assay. CONCLUSION: The recombinant IFNα2b-(G4S)n-Tα1 (n=1-3) fusion proteins were successfully expressed in P. pastoris. Purified fusion proteins exhibit both antiviral activity of IFNα2b and immunomodulatory activity of Tα1 in vitro. These results will be the basis for further evaluation of the fusion proteins' function in vivo.
Fusion protein, Interferon α2b, Thymosin α1, Antiviral assay, E-rosette assay
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【期刊论文】细胞周期末期促进复合物亚基CDC16Hs与DNA双链断端修复蛋白Ku80相互作用
吕红, YU Yao, DING Zhi-jie, MA Jun-hao, L
复旦学报(自然科学版),2004,43(2):135~140,-0001,():
-1年11月30日
CDC16Hs是细胞周期末期促进复合物(APC)的亚基。利用基于LexA的酵母双杂交系统,把它作为诱饵蛋白筛选人胎脑文库,发现它与DNA双链断端修复蛋白Ku80的羧基端相互作用。CDC16Hs和全长Ku80的结合通过pull down实验在体外得到验证。
CDC16Hs, Ku80, DNA双链断端, 酵母双杂交
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【期刊论文】人血管生成素样蛋白4在毕赤氏酵母中的表达及其生物活性的初步研究
吕红, L
复旦学报(自然科学版),2004,43(2):147~151,-0001,():
-1年11月30日
将编码人的血管生成素样蛋白4(ANGPTL4)的cDNA克隆至分泌表达载体pPIC9k上,在Pichia Pas-toris酵母宿主菌SMD1168中获得分泌表达;用MTT方法检测的细胞生长抑制实验结果表明,发酵液中分泌表达的重组蛋白ANGPTL4对人脐静脉内皮细胞的生长具有一定的抑制作用。
血管生成素样蛋白4, 酵母分泌表达, 内皮细胞增殖分析
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【期刊论文】人纤溶蛋白酶原K5在毕赤酵母中的表达及其生物活性鉴定
吕红, SHEN Li, SONG Da-Xin, GAO Bo-Yu, L
生物工程学报,2004,20(6):879~883,-0001,():
-1年11月30日
化学合成人纤溶蛋白酶原K5(pK5)的编码基因并克隆到毕赤氏酵母表达系统的分泌型载体pPIC9K上,将重组质粒经BglⅡ单酶切后电转化Pichia pastoris GS115菌株,筛选出对G418有高抗性和在MM培养基上生长缓慢的转化子。经摇瓶发酵和甲醇诱导后,用15%SDS-PAGE检测发酵上清液,表明有重组蛋白pK5的高表达。经CM.Sepherose离子交换柱和Superdex 75分子筛层析两步分离纯化,获得了纯度达到98%的rpK5。用MTT方法检测的结果表明,纯化的rpK5可显著地抑制人血管内皮细胞的生长。
人纤溶蛋白酶原K5,, 酵母,, 分泌表达,, 内皮细胞增殖分析
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